DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-29Ca and Clec1b

DIOPT Version :9

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001178907.1 Gene:Clec1b / 500336 RGDID:1563517 Length:229 Species:Rattus norvegicus


Alignment Length:107 Identity:20/107 - (18%)
Similarity:44/107 - (41%) Gaps:11/107 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 QKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKKKYWVDINSRANDGASWI----STLSG 189
            ::.:.|:.:...|.:....|.....:..|..|....|..: |:.: ||.|....|:    |.|..
  Rat   118 RRNLTWEDSKLFCSEQNATLVKTASQSTLKYITDRITSVR-WIGL-SRQNSKKDWMWEDSSVLHN 180

  Fly   190 RDVPFLKWKPNLATNIHNHCVYINSNEMYFENCANDNYFACQ 231
            ..:...:   |...|:  :|.|:::.:::..:|...:|..|:
  Rat   181 NSIDLSR---NTEENM--NCAYLHNGKIHPASCTERHYLICE 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 19/103 (18%)
Clec1bNP_001178907.1 CLECT_NK_receptors_like 102..218 CDD:153063 20/107 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I5382
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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