DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-29Ca and Clec4m

DIOPT Version :9

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:235 Identity:51/235 - (21%)
Similarity:97/235 - (41%) Gaps:41/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFSIFALWNF-WGVSAKKQDTSTGTNELPKAPM---PYYTIENIDMHQQHWFTYNSLRQNGTLWR 68
            :|.:|...|. |....|::......|:|....|   |....:|..|.::.......|:.. .|.|
  Rat    81 LFQVFKTTNTQWQEEPKQEKILEELNQLTDELMSRIPISQGQNESMQEKISEQLTQLKVE-LLSR 144

  Fly    69 I-------GNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENV-KMSNKIKMSVFK-------- 117
            |       .:|::::..:|...:.::.:|:.:|:.|.|...|.: :...::|..:.:        
  Rat   145 IPVFQVQNESMQEKISEQLTQLKAELLSKIPSLQVQDESKQEKIYQQLVQMKTELLRLCRLCPWD 209

  Fly   118 ---KIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKK---KYWVDINSR 176
               .:|:.:|..:.|:.  |:.|...|::....|..|..::|  :.|.:.|.|   ..|:.::..
  Rat   210 WTFLLGNCYFLSKSQRN--WNDAVRACKEEKAQLVIINSDEE--QTFLQLTSKAKGPTWMGLSDL 270

  Fly   177 ANDGASWI----STLSGRDVPFLK-WKPNLATNI-HNHCV 210
            .|: |:|:    ||||.|   |.| |......|| ...||
  Rat   271 KNE-ATWLWVDGSTLSSR---FQKYWNRGEPNNIGEEDCV 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 25/89 (28%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 28/109 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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