DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3021 and SLM3

DIOPT Version :9

Sequence 1:NP_652639.1 Gene:CG3021 / 53546 FlyBaseID:FBgn0040337 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_010251.1 Gene:SLM3 / 851529 SGDID:S000002191 Length:417 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:135/398 - (33%)
Similarity:202/398 - (50%) Gaps:45/398 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NVVVGVSGGVDSAVSAHLLAEQGFKVLGVFMRNWDEA---DEVGR--CSGEADLKDAEWACRQLG 63
            ||:|.:|.||||:|:|.|.|.:.....||:|:||.|:   |:.|:  |. |.|.:|.....:.|.
Yeast    28 NVIVAMSSGVDSSVAAALFAGEFPNTRGVYMQNWSESQSLDDPGKEPCY-ERDWRDVNRVAKHLN 91

  Fly    64 VELRQVNYVREYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDA--VATGHY 126
            :.:.:||:.::||..||...|..|..|.||||||.||:.:||....:...|..|...  :.||||
Yeast    92 IRVDKVNFEQDYWIDVFEPMLRGYSEGSTPNPDIGCNKFVKFGKLREWLDEKYGTGNYWLVTGHY 156

  Fly   127 AR-----NSLGNYLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDL 186
            ||     |..|.:          .||......|||:::|:.|:...|...:.|:|...|.:|:||
Yeast   157 ARVMQEMNGKGLF----------HLLRSIYRPKDQSYYLSQINSTVLSSLLLPIGHLTKPEVRDL 211

  Fly   187 AKKIGFQRLAKKKESTGICFV-----GKRNFKDFIQEYITSKRGPFLDID--SGAVV--GHHEGI 242
            ||..|.. .|:|.:|.|||||     ||  ||:|::.|:.|..|..:.:|  |||..  |.|:|:
Yeast   212 AKYAGLP-TAEKPDSQGICFVNNSQHGK--FKNFLKHYLPSSPGDIITVDPQSGAKTTWGRHDGL 273

  Fly   243 HQWTVGQRCRLS------SFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQ 301
            ..:|:||:..:|      ::...:||:.|...:|.|.:..|.::|||.|..:.::..:.|..:..
Yeast   274 WSYTIGQKVGISMPQADPNYQGTWFVSEKLRDTNEILIVRGRDNPALYSDTMRIENFSSLGPRED 338

  Fly   302 QI--LSDTGSLRCRFR-FQHTKPLVDCQLSISPSN-TFLVELDAPLRAITPGQYAVFYDDTACLG 362
            .|  ..:||:|..:|| .|....:..|:|:.|..| ...:.|.:..|||||||....|.|...||
Yeast   339 TINAFQNTGALTLQFRSLQVPVQIKSCKLNRSADNLDITIHLASKQRAITPGQSCCLYIDDRVLG 403

  Fly   363 SARILSAN 370
            |..|...|
Yeast   404 SGPISHVN 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3021NP_652639.1 tRNA_Me_trans 14..366 CDD:281101 127/382 (33%)
tRNA_Me_trans 14..366 CDD:238956 127/382 (33%)
SLM3NP_010251.1 trmU 27..407 CDD:273069 133/392 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343748
Domainoid 1 1.000 184 1.000 Domainoid score I687
eggNOG 1 0.900 - - E1_COG0482
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5589
Inparanoid 1 1.050 185 1.000 Inparanoid score I936
Isobase 1 0.950 - 0.960964 Normalized mean entropy S1788
OMA 1 1.010 - - QHG62488
OrthoFinder 1 1.000 - - FOG0003721
OrthoInspector 1 1.000 - - oto99058
orthoMCL 1 0.900 - - OOG6_101163
Panther 1 1.100 - - LDO PTHR11933
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R765
SonicParanoid 1 1.000 - - X2579
TreeFam 1 0.960 - -
1615.740

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