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Protein Alignment CG3021 and trmu

DIOPT Version :10

Sequence 1:	NP_652639.1	Gene:	CG3021 / 53546	FlyBaseID:	FBgn0040337	Length:	389	Species:	Drosophila melanogaster
Sequence 2:	NP_001018435.1	Gene:	trmu / 553625	ZFINID:	ZDB-GENE-050522-540	Length:	416	Species:	Danio rerio

Alignment Length:	388	Identity:	158/388 - (40%)
Similarity:	227/388 - (58%)	Gaps:	15/388 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MIRNVVVGVSGGVDSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEADLKDAEWACRQLGVE 65
            ::|:||..:||||||:|||.||...|:.|.||||:|||..:|.|.||.:.|.:||...|:.|.:.
Zfish     3 VLRHVVCAMSGGVDSSVSALLLKRMGYHVTGVFMKNWDSQEEKGLCSSDRDCEDAYKVCKMLDIP 67

  Fly    66 LRQVNYVREYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNS 130
            ..:|:||:|||..|||..|.:|:.|.||||||:||:||||..|:::|:..||.||:|||||||.|
Zfish    68 FHEVSYVKEYWHEVFSNLLWEYERGRTPNPDIICNKHIKFKHFYQYAVNTLGADAMATGHYARTS 132

  Fly   131 LGN---------------YLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQK 180
            ..:               :.:........||...||..|||||||:.||:.||:.|:|||....|
Zfish   133 QEDEEVFQQKLTEAPKSLFRDRFEIRKPVRLYQGADLLKDQTFFLSQISQDALRHTLFPLAGLTK 197

  Fly   181 SQVKDLAKKIGFQRLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQW 245
            ..||.:|.:.|||.:.|||||.||||:|||:|::||.||:..:.|.|:.|:.|.::|.|:|....
Zfish   198 GYVKKIAAEAGFQHVLKKKESMGICFIGKRDFENFILEYLEPRPGNFVSIEDGQIMGKHKGWFTL 262

  Fly   246 TVGQRCRLSSFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQQILSDTGSL 310
            |:|||.|:......:||..|:..:..::|.....||||....:..|..:|:..:....|..|..:
Zfish   263 TLGQRARIGGRADAWFVVDKDVTTADVFVCPSTFHPALFRDTLQTDRFHWIAEEPPAELVHTQMM 327

  Fly   311 RCRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQYAVFYDDTACLGSARILSANPLK 373
            .|.|.|.:..||..|.::::...:..|.:..|:|.:..||:||.|....||||.:|:...|.|
Zfish   328 DCHFCFNNRMPLTPCTVTLNLDGSVWVMVKEPMRGMATGQFAVLYKGHECLGSGKIIRLGPTK 390

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.