DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and Gasp

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_649611.2 Gene:Gasp / 40745 FlyBaseID:FBgn0026077 Length:258 Species:Drosophila melanogaster


Alignment Length:266 Identity:55/266 - (20%)
Similarity:78/266 - (29%) Gaps:117/266 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVYALVAGLFYFSEGKPCPEK--TRPHKTRCDAFYKC----RELPSNSHVWIPVKCNEGLVFES 62
            |:|:..:.|.........||:.  ..||.|.||.::||    .||.:         |..||.|::
  Fly     5 LVVFVALFGAAVAQSSFKCPDDFGFYPHDTSCDKYWKCDNGVSELKT---------CGNGLAFDA 60

  Fly    63 S-----LGSC----------------------------VLPGED-----WECITPSEMSSTQSPP 89
            :     ..:|                            :.|.|:     |.|.. .|.|..|..|
  Fly    61 TDSKYLTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIFPDENKCDVFWNCWN-GEPSRYQCSP 124

  Fly    90 GRP-DADILIVNDMDE-----------------AGLL-----LSDSSHKDD-------------- 117
            |.. |.|..:....|:                 ||.|     .|..:|.:|              
  Fly   125 GLAYDRDARVCMWADQVPECKNEEVANGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVARE 189

  Fly   118 -----GTVEIILDSTLSSEENEVNEEAAKSKPQPE-----EDFSSNHNFDSSGDGELVELDSPAG 172
                 |||..|.||           :...:...||     ||:..:.:..|....||:     ||
  Fly   190 YGCPIGTVFKIGDS-----------DGTGNCEDPEDVPGCEDYYGDLDLKSIRKSELL-----AG 238

  Fly   173 LKPENR 178
            |..|.|
  Fly   239 LNSEGR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696 16/87 (18%)
CBM_14 784..828 CDD:426342
GaspNP_649611.2 ChtBD2 21..72 CDD:214696 16/59 (27%)
CBM_14 97..144 CDD:426342 12/47 (26%)
CBM_14 170..218 CDD:426342 10/58 (17%)
Blue background indicates that the domain is not in the aligned region.

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