DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and CG10140

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_648648.2 Gene:CG10140 / 39511 FlyBaseID:FBgn0036363 Length:297 Species:Drosophila melanogaster


Alignment Length:255 Identity:57/255 - (22%)
Similarity:83/255 - (32%) Gaps:70/255 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   748 LDVFQKSILPLMTKSPSA----------LNELGNVEVITCQAGVRQPNQTDCTRYFVCSKKDGKV 802
            |||...:...|.|.|.::          |:..|||     ...|..|...||.||::|  :.|:.
  Fly    24 LDVSGTTDSTLETDSTTSGLEYGLITGNLSICGNV-----ADNVFLPFVGDCNRYYLC--RSGQA 81

  Fly   803 LSYSCP-PYTAFNKQTRICDAPTYAQCSNVIPAFNGYTIDSNRRLQMEAIKMLSEAKRRQEAALK 866
            :...|. || .||..|:.|..|..|.|.....|||..|....|......:....:...||     
  Fly    82 IELQCEWPY-EFNANTQSCVHPGDADCLPTCEAFNFSTFSYQRTCTRYVLCYYGKPVLRQ----- 140

  Fly   867 AQSIASLIQQYGSAQKAQPGISSNVENDPLDSYVVSLPEVSLSTTTSRPTIIQSSSGVSSGGSST 931
                            .|.|:..|...|..|     .|:        ....::|...:.|..   
  Fly   141 ----------------CQDGLQYNSATDRCD-----FPQ--------NVDCVESECSIYSNA--- 173

  Fly   932 PAKKRKYYCKEGDKIPDQTSISSYFVCYKNAQGQMKGHKMSCSKSLLFCPKTLMCTLASK 991
                  |:.:   .:|.:.|...||:|     |.....:.:|:..|.|..|...|.:.||
  Fly   174 ------YHLR---YVPSKVSCQKYFIC-----GNGIPREQTCTAGLHFSTKCDCCDIPSK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696
CBM_14 784..828 CDD:426342 16/44 (36%)
CG10140NP_648648.2 CBM_14 63..106 CDD:426342 15/45 (33%)
CBM_14 111..161 CDD:426342 13/83 (16%)
CBM_14 178..222 CDD:426342 13/47 (28%)
ChtBD2 244..292 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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