DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and CG43896

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001261732.1 Gene:CG43896 / 39360 FlyBaseID:FBgn0264488 Length:2113 Species:Drosophila melanogaster


Alignment Length:1135 Identity:199/1135 - (17%)
Similarity:333/1135 - (29%) Gaps:420/1135 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VKCNEGLVFESSLGSCVLPGEDW-ECIT-----PSEMSSTQSPPGRPDADILIVNDMDEAGLLLS 110
            :.|.:..|:|.|.|:||:...|: .|:.     |.|..:|..                  |....
  Fly  1163 INCADEHVYEESAGTCVVAACDYTSCLNRVAFEPFEAKNTTE------------------GFCSC 1209

  Fly   111 D---------SSHKDDGTVEI-ILDSTLSSEENEVNEEAAKSKPQPEEDFSSNHNFDSSGDGELV 165
            |         :.|..|....| :|..|::.....:.|...:|:.:|....::|..|.|..|.:.|
  Fly  1210 DGVPYFHQCQTGHVFDKAQGICLLKDTMAMISCNLRECLKRSQFEPFAAENTNSGFCSCDDLQRV 1274

  Fly   166 ELD-SPAG----LKPENREEVTSSSMEHRT-EVEK---LRTELKQVAGISEIAKPGSPIDPSLTA 221
            .:. .|.|    ..|| ....||.|::.|: |.|:   :..|::                 |:.|
  Fly  1275 SVTYHPCGEGEIFAPE-FGMCTSHSIQKRSVEAEENICISNEMR-----------------SVPA 1321

  Fly   222 HLQRLSQLIDGLQQTYQKTDKPQTEMRPDQLNAFLAHFDIKNRYEMMNPMEQTSSTITTTTSTTE 286
            :..:....|||  :..::|...|....|:|........|:...|..:       |.|.|.|:.:|
  Fly  1322 NCSQYEMCIDG--RWRRRTCSDQRYYNPEQQRCLEPRDDLVCAYARV-------SNIPTCTAISE 1377

  Fly   287 APKIKPRLPEPTSN----------KTRLQEHLSHHRLEPETKLMLSNAVPY-----SSHGTTGQG 336
            :..|    |..:.|          |.||:.....|...|    ::.:.:|:     .....|...
  Fly  1378 SMTI----PAKSGNCMQYFRCSGGKWRLRNCPKQHYYSP----LIGSCLPFPRGHEQDRNQTICS 1434

  Fly   337 YANSQIVVNRPEGSVMFALPP-------NYGMSQEQ---------GSYVSHQSHEYSDHEPKISE 385
            :|.|::..|..:.....|:.|       :|.|..:.         |.|.|.: |.|.     :..
  Fly  1435 WAMSKLAGNSSDDCQHLAVRPSLAGGCQSYLMCLDNSWWLHQCPLGMYFSRE-HNYC-----LPN 1493

  Fly   386 DTLKTVLEL----------SKQMIAAQNLPKVLPNPGFNGAYYQPILQPVFMSPQGNPFQQYYGM 440
            |..:.:|..          |:.::.:.:..:|..:   ||.:.:...|      :...|:...|.
  Fly  1494 DAGQCILPAERSGNCSNGESRSVVGSCHSYEVCSD---NGQWIRRRCQ------EREQFEPMLGC 1549

  Fly   441 PPPLNPHYMQHKKHSAGGGSSSNGY--------------NKPSTTIIHNNVIPVHLSSTSSGEK- 490
            .|             :.|....||.              |..|...::......||.|...|.. 
  Fly  1550 VP-------------SDGSCQDNGMRRICREGELQAQFGNNCSQGFLYCEAEEWHLGSCLKGHSF 1601

  Fly   491 -----------------EVLDTYGNSLGVYPSMDKHVTASQASGME----------YMTTARPVT 528
                             ..|......||            |..|:.          |:...:..|
  Fly  1602 ARNRNKCQLQSQCQLQIRDLPAENQCLG------------QIDGLSVPDPTDCTRFYLCLQQVPT 1654

  Fly   529 I---ATTASTYSAQYGSQSPFASDYTLTTPRPFEQQPSAA---TVATYYTPSPHLGEHNANRVYQ 587
            |   .::.|.:.:..|...|......|......|.....|   ...:||:.|    ..|...:.|
  Fly  1655 ILQSCSSGSFFDSNQGYCRPNDGSCQLAICNGLEDGKLVAHPEDCRSYYSCS----SQNGTSLVQ 1715

  Fly   588 PTESYPTMNIPRPMDMFPGQIDADRVSIRPNSQKIESMEMDEDMIKANYQSGSGIGNGNGNTLPH 652
            ..|.          ..|...:...||. ....:|:.:.:..|...:..|    |:   :|..|||
  Fly  1716 CDEG----------QYFHSLLSICRVD-HGQCRKVSNQDETETAPRLCY----GL---HGVKLPH 1762

  Fly   653 VLTYSSDMSQQLAPSNGYLEQSYSLQQP-----QHHHHPYMPRPRPTMSSSIYSDSDGNMEMSMF 712
            .|.           .|.|......|..|     ||..:|.:....|. |.::...|:|.::    
  Fly  1763 ELY-----------CNLYYACVKGLAIPVECPVQHQFNPVLSICEPE-SQAVQPCSNGQLD---- 1811

  Fly   713 TSSPNLNPFKGGNVKYPGSTSPNGQLVNFNGNFISLDVFQKSILPLMTKSPSALNELGNVEVITC 777
                       |||.|                                     :...||:     
  Fly  1812 -----------GNVSY-------------------------------------VYRCGNL----- 1823

  Fly   778 QAGVRQPNQTDCTRYFVCSKKDGKVLSYSCPPYTAFNKQTRICDA-------------------- 822
            |.|....|:|||||||:|:  .|...:..|...|.|:.:..:|.|                    
  Fly  1824 QDGTFLANRTDCTRYFICA--GGVATAQRCAAGTFFDSEQLLCLADDGSCPLVESVPDDDDNPNN 1886

  Fly   823 ------------------PTYAQCSNVIPAFNG-------YTIDS--NRRLQM-EAIKMLSEAKR 859
                              |..|.|:|.....:|       || |:  |..||. :..::.|:...
  Fly  1887 QHVPPDPVVCEGKHGYLMPDPANCNNFYLCVSGKLRHELCYT-DNFFNATLQQCQPYEIASDGNN 1950

  Fly   860 RQEAALKAQSI-------------------------------ASLIQQ-----YGSAQKAQPGIS 888
            :.|:.|:::.|                               ||:.:|     |.|.:..:| :|
  Fly  1951 QTESPLQSRQIDLGGHEKAVTNGICKDAPTSFAGICGVIGNGASVAEQGDCRRYTSCEDDEP-VS 2014

  Fly   889 SNVEN-DPLDSYVVSLPEVSLSTTTSRPTIIQSSS--GVSSGGSSTPAKKRKYYCKEGDKIPDQT 950
            ....| :..||.      :.:...:....::::..  ||.:|             |.|....|..
  Fly  2015 QRCRNGESFDSL------LGICRQSDGTCLLENGERVGVCNG-------------KHGQLARDAD 2060

  Fly   951 SISSYFVCYKN-------AQGQMKGHKMSC 973
            :...||.|...       |||:......:|
  Fly  2061 NCRGYFTCVHGQQIDGECAQGEFFNRLTNC 2090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696 7/17 (41%)
CBM_14 784..828 CDD:426342 17/81 (21%)
CG43896NP_001261732.1 CBM_14 96..147 CDD:426342
CBM_14 153..206 CDD:426342
CBM_14 211..257 CDD:426342
CBM_14 294..343 CDD:426342
CBM_14 354..395 CDD:426342
CBM_14 427..468 CDD:426342
ChtBD2 488..535 CDD:214696
CBM_14 544..593 CDD:426342
CBM_14 <1320..1361 CDD:426342 9/42 (21%)
ChtBD2 1627..1675 CDD:214696 9/59 (15%)
CBM_14 1684..1733 CDD:426342 11/63 (17%)
ChtBD2 1752..1797 CDD:214696 14/62 (23%)
CBM_14 1820..1868 CDD:426342 19/54 (35%)
CBM_14 1896..1939 CDD:426342 11/43 (26%)
ChtBD2 2046..2091 CDD:214696 13/58 (22%)
Blue background indicates that the domain is not in the aligned region.

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