DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and CG13312

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_648260.1 Gene:CG13312 / 39010 FlyBaseID:FBgn0035931 Length:342 Species:Drosophila melanogaster


Alignment Length:261 Identity:59/261 - (22%)
Similarity:92/261 - (35%) Gaps:65/261 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   778 QAGVRQPNQTDCTRYFVCSKKDGKVLSY----------SCPP-YTAFNKQTRICDAPTYAQCSNV 831
            ||..::.|:.|.|:.|.|:......|..          :|.. |......|:||..|    ...|
  Fly    88 QADCQECNKCDETQTFACTGTQSFALCLGTDTVQDSVGTCASGYVCNINDTQICGLP----ADGV 148

  Fly   832 IPAFNGYTIDSNRRLQMEAIKMLSEAKRRQEAALKAQSIASLIQQYGSAQKAQP--GISSNVEND 894
            :|..: |:.||       ....:|.......||..:.|.||   .|.:|.::|.  .:..|....
  Fly   149 MPTCS-YSDDS-------TTTTVSSTTSSTTAAPPSTSSAS---TYCAAVQSQGKYAVGYNAYTT 202

  Fly   895 ---------------------PLDSYVVSLPEVSLST--TTSRPTIIQSSSGVSSGGSSTPAKKR 936
                                 |...|..|..|:.:||  :|...|...||:..::..:|.|    
  Fly   203 CRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCSTTATTSSTTTAAPTTSNP---- 263

  Fly   937 KYYC---KEGDKIPDQTSISS----YFVCYKNAQGQMKGHKMSCSKSLLF--CPKTLMCTLASKC 992
            :.||   :.....|..|..|:    |..|:.|. |...|:..:|..||.:  ..:|.:.||.|.|
  Fly   264 EAYCQAMQSAGYYPVGTDASTTCHQYIDCFLNG-GTWGGNMYTCPGSLYYNSASRTCVSTLPSTC 327

  Fly   993 T 993
            :
  Fly   328 S 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696
CBM_14 784..828 CDD:426342 12/54 (22%)
CG13312NP_648260.1 None
Blue background indicates that the domain is not in the aligned region.

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