DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and CG4835

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:1034 Identity:208/1034 - (20%)
Similarity:322/1034 - (31%) Gaps:270/1034 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CDAFYKCRELPSNSHVWIPV--KCNEGLVFESSLGSCVLPG-EDWECITPSEMSSTQSPPGRPDA 94
            |.|:..|      ::.| ||  .|.|..||...||.|..|. .|.|.: |...::|:.||.....
  Fly   200 CQAYINC------TYGW-PVLNYCIEDKVFNKYLGICDTPDMADCEEL-PLPTTTTEMPPTSTTE 256

  Fly    95 DILIVNDMDEAGLLLSDSSHKDDGTVEIILDST--LSSEENEVNEEAAKSKPQPEEDFSS-NHNF 156
            :.::.....| |:.......|.:|..|...:.:  |:.:....:.:..    ||::.|:: .|..
  Fly   257 EDVVCGPTPE-GIEEDYCVPKGNGFYEYPYNCSGYLACKNGCTDLDYC----QPDKLFNNWLHIC 316

  Fly   157 DSSGDGELVELDSPA--GL--KPENREEVTSSSMEHRTEVEKLRTELKQVAGISEI--------- 208
            |:........|..|.  |.  ||......|:.|:   |......|.|......:||         
  Fly   317 DTPDSVRCDPLPFPTTPGTTNKPTTPSVTTTPSI---TTTPSTPTTLPSDGSTTEIHSSTTEEIV 378

  Fly   209 -AKPGSP--IDP---------SLTAHLQRLSQ-LIDGLQQTYQKTDKPQTEMRPDQLNAFLAHFD 260
             ...|.|  :||         ::.|::...|: ||....|.......|.|...||.|..     |
  Fly   379 TTTDGLPSDVDPNDCKDEKDGTIFAYIGNCSEYLICKDNQVQMGHCPPNTLFNPDLLVC-----D 438

  Fly   261 IKNRYEMMNPMEQTSSTITTTTSTTEAPKIKPRLPEPTSNKTRLQEHLSHHRLEPETKLMLSNAV 325
            ..:....:.  ::|::.|.||..||...|     ..||:..|.:...|...:|....:|..|.:.
  Fly   439 EPDDVVCLG--DRTTTPIPTTIPTTTTEK-----TTPTTTTTTVATTLGPDQLCDGQELGASFSY 496

  Fly   326 P------YSSHGTTGQGYANSQIVVNRPEGSVMFALPPNYGMSQEQGSYVSHQSHEYS-DHEP-- 381
            |      |...|                 |......|..|      |||....:.:.. |..|  
  Fly   497 PDDCSKYYLCLG-----------------GGQWTLAPCIY------GSYFDPSTGQCGPDVAPDA 538

  Fly   382 -KISEDTLKTVLELSKQMIAAQN-LPK------------VLPNPGFNG--------AY------Y 418
             |.|:.|..|....::.....:| .||            |.|..|..|        ||      |
  Fly   539 CKPSQVTTTTTTTTTETTTTERNTTPKSTATTTERTTTTVAPKTGICGGRNENENIAYPNNCTKY 603

  Fly   419 QPILQPV---FMSPQGNPFQQYYGMPPPLNPHYMQHKKHSAGGGSSSN----GYNKPSTTIIHNN 476
            ...:.|:   |..|.|..|..      .|........:....|..|:.    ||.:|.       
  Fly   604 IVCVSPIPIAFFCPDGTFFSS------KLEKCIDDWDESDCEGDQSTTTLEPGYTRPP------- 655

  Fly   477 VIPVHLSSTSSGEKEVLDTYGNSLGVYPS--------MDKHVTASQASGM-EYMTTARPVTIATT 532
              |.....|:|..    ||:     .||.        :|.::........ ||..   |:|    
  Fly   656 --PEPTMCTNSSR----DTF-----PYPDNCQWFIRCVDDYIYMMDVCNCGEYYD---PIT---- 702

  Fly   533 ASTYSAQYGSQSPFAS---DYTLTTPRPFEQQPSAATVATYYTPSPHLG-----EHNANRVYQPT 589
                 .:.|:..|..:   |||.||....|  |:..|..|  .|.|..|     |..|...| |.
  Fly   703 -----EKCGADVPSDACRWDYTSTTSTTSE--PTTTTAVT--RPPPQKGPCDDVEDGALVAY-PN 757

  Fly   590 ESYPTMNIPRPM---------DMFPGQ----IDAD--RVSIRPNSQKIESMEMDEDMIKANYQSG 639
            :....:...||:         |.|..:    :||.  ..||...::..||.....|         
  Fly   758 DCSKYIQCDRPIAVAFECEKGDEFSVELGKCVDASLANCSITTTAKPSESTTTPRD--------- 813

  Fly   640 SGIGNGNGNTLP-HVLTYSSDMS---QQLAPSNGYLEQSYSLQQPQHHHHPYMPRPRPTMSSSIY 700
                 |.|:|.| ...|.||..|   ....||.....:|.:....:........:...|..||..
  Fly   814 -----GEGSTTPSEPSTGSSTESSTESTTEPSTESTTESTTESTTESTTESSTGQSTETTESSTV 873

  Fly   701 SDSDGNMEMSMFTSSPNLNPFKGGNVKYPGSTSPNGQLVNFNGNFISLDVFQKSILPLMTKSPSA 765
            ..:|.:...|..::.|:....:      ||:|:|...                     .|:.|:.
  Fly   874 LSTDTSESPSTISTPPSSTTME------PGTTNPEAS---------------------TTEKPAD 911

  Fly   766 LNELGNVEVITCQAGVRQPNQTDCTRYFVCSKKDGKVLSYSCPPYTAFNKQTRICDAPTYAQCSN 830
                |..|..|..:.|..|.  :|::|..|...  ..:.|.||....|:.....|..|..|.||.
  Fly   912 ----GICEGKTDDSLVPYPR--NCSKYIKCQYP--IPVGYDCPDGLEFSPTELTCMDPELAGCST 968

  Fly   831 VIPAFNGYTIDSNRRLQMEAIKMLSEAKRRQEAALKAQSIASLIQQYGSAQKAQPGISSNVENDP 895
                          :|....:..||...........:.:..:...:..:..|.....|:.:....
  Fly   969 --------------KLTTPGLTTLSTEASSTPVTTVSTTPEATTTEMSTTPKTTTTESTTISTTT 1019

  Fly   896 LDSYVVSLPEVSLSTTTSRPTIIQSSSGVSSGGSSTPAKKRKYYCKEGDKIPDQTSISS 954
            .||   :.|:.:.:.:|:..|....|:.:|:..::|.....|....|...||..|:.|:
  Fly  1020 TDS---TTPQTTTTESTTSKTTTTESTIISTTPTTTEPTTPKTTTTESTTIPTTTTEST 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696 13/38 (34%)
CBM_14 784..828 CDD:426342 11/43 (26%)
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342 14/43 (33%)
CBM_14 273..322 CDD:426342 9/52 (17%)
CBM_14 393..444 CDD:426342 11/55 (20%)
CBM_14 485..539 CDD:426342 13/76 (17%)
CBM_14 585..638 CDD:426342 10/58 (17%)
CBM_14 661..714 CDD:426342 13/73 (18%)
CBM_14 744..796 CDD:426342 10/52 (19%)
CBM_14 914..962 CDD:426342 12/51 (24%)
CBM_14 1175..1212 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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