DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42296 and obst-E

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_723116.1 Gene:obst-E / 33806 FlyBaseID:FBgn0031737 Length:249 Species:Drosophila melanogaster


Alignment Length:241 Identity:50/241 - (20%)
Similarity:80/241 - (33%) Gaps:57/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   769 LGNVEVITCQAGVRQPNQTDCTRYFVCSKKDGKVLSYSCPPYTAFNKQTRICDAPTYAQCSNVIP 833
            ||:.|..|........:|  |..|..|  :||..:...||....|:::|:.....|||..|.   
  Fly    20 LGSPECPTPNGRFASGDQ--CDSYTEC--QDGTPVEKLCPDGLLFHQRTKATGECTYAPYST--- 77

  Fly   834 AFNGYTIDSNRRLQMEAIKMLSEAKRR-----QEAALKAQSIASLIQQYGSAQKAQPGISSNVEN 893
                    ...|.:::......|..|:     ...|.|.....:......|..|...|::.|.| 
  Fly    78 --------CKERARLQPANGTEECPRQFGFYPNGDATKCGVYRNCAHGVASLTKCPEGLAFNEE- 133

  Fly   894 DPLDSYVVSLPEVSLSTTTSR------PTIIQSSSGVSSGGSSTPAKKRKYY-----CKEGDKIP 947
                :|....|::..|.....      |....:....::....:|..:.:||     ||:     
  Fly   134 ----TYQCDWPDLVESCNAEAYLGFNCPAADSADDSAAAAVDVSPEGELRYYRHPQTCKK----- 189

  Fly   948 DQTSISSYFVCYKNAQGQMKGHK--MSCSKSLLFCPKTLMCTLASK 991
                   ||||       :.||.  .:|.|.|.|..:|.:|...:|
  Fly   190 -------YFVC-------VNGHPRLYNCGKYLAFNSQTKLCDFYNK 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696
CBM_14 784..828 CDD:426342 13/43 (30%)
obst-ENP_723116.1 ChtBD2 23..65 CDD:214696 11/45 (24%)
CBM_14 95..146 CDD:426342 10/55 (18%)
CBM_14 180..225 CDD:426342 17/61 (28%)
Blue background indicates that the domain is not in the aligned region.

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