DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42296 and cpg-1

DIOPT Version :10

Sequence 1:NP_652638.2 Gene:CG42296 / 53544 FlyBaseID:FBgn0259192 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:712 Identity:126/712 - (17%)
Similarity:231/712 - (32%) Gaps:190/712 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 AVPYSSHGTTGQGYANSQIVVNRPEGSVMFALPPNYGMSQEQGSYVSHQSHEYSDHEPKISEDTL 388
            |..|:.:|..|. |.|..:.....:||       ..|...:.| :||.......|.:....||.|
 Worm    13 ASAYAQYGVAGM-YENLPLETTTLDGS-------GDGSGADNG-FVSGADAVAIDTDCSTKEDGL 68

  Fly   389 KTVLELSKQMIAAQ-NLPKVLPNPGFNGAYYQPILQPVFMSPQGNPFQQYYGMPPPLNPHYMQHK 452
            ..:...|.|.:... .:.:::..|.  ...|.|.:.....|         |.:|           
 Worm    69 YAIGGCSPQFLTCSGGISRIMDCPA--DLIYDPRIVACEYS---------YNVP----------- 111

  Fly   453 KHSAGG-----GSSSNGYNKPSTTIIHNNVIPVHLSSTSSGEKEVLDTYGNSLGVYPSMDKHVTA 512
              ..||     .|:...|....||:  |...||..::|:..| :|......:...|..:|.:.|.
 Worm   112 --QCGGVPQDVTSTQEAYPSEETTV--NPYAPVEEATTTPAE-DVTVPEETTTEAYAPVDDYSTT 171

  Fly   513 SQASGMEYMTTARPVTIATTASTYSAQYGSQSPFASDYTLTTPRPFEQQPSAATVAT-------- 569
            :.|..:       ||.:.|||          ||:|.....||..|...:|...:..|        
 Worm   172 TPAEDV-------PVPVETTA----------SPYAPIVPYTTGAPAADEPVTRSAVTKSCVGKAD 219

  Fly   570 -YYTPSPHLGEHNANRVYQPTESYPTMNIPRPMDMFPGQIDADRVSIRPNSQKIESMEMDEDMIK 633
             :|:    .|| .::.....:..|          :.|.|..|             .:..||..:.
 Worm   220 GFYS----FGE-CSDHYTACSNGY----------LIPMQCPA-------------RLAFDEARVI 256

  Fly   634 ANY-----QSGSGIGNGNGN---TLPHVLTYSSDMSQQLAPSNGY-LEQSYSLQQPQHHHHPYMP 689
            .:|     :..:|.||..|:   |.|       :.|.::..|||| .|::               
 Worm   257 CDYVMNVPECTNGSGNDEGSADETTP-------ESSGEMPYSNGYGYEET--------------- 299

  Fly   690 RPRPTMSSSIYSDSDGNMEMSMFTSSPNLNPFKGGNV-KYPG--STSPN--GQLVNFNGNFISLD 749
               .|::..:.|..|            ...|.....| :||.  :|:.|  ...:.:....:   
 Worm   300 ---TTVAEDVPSTKD------------YAEPIAAAYVARYPSEKTTAENVPTTTIGYEPEVV--- 346

  Fly   750 VFQKSILPLMTKSPSALNELGNVEVITCQAGV------RQPNQTDCTRYFVCSKKDGKVLSYSCP 808
               ::..|.:.::.:.:.....||..|.:|.|      .:|...:.|..:|    :....:...|
 Worm   347 ---ETTAPYVEETTTTVGYKPEVEETTTEAEVPTTTVGYEPEIVETTAPYV----EETTTAADVP 404

  Fly   809 PYTAFNKQTRICDAPTYAQCSNVIPAFNGYTIDSNRRLQMEAIKMLSEAKRRQEAALKAQSIASL 873
            ..||. .:..:.:..|.|:    :|...  |:.....:....:..:.|.....:...........
 Worm   405 STTAV-YEPEVVETTTEAE----VPTTT--TVGYEPEVVETTVPYVEETTTAADVPTTTVGYEPE 462

  Fly   874 IQQYGSAQKAQPGISSNVENDPLDSYVVSLPEVSLSTTT--SRPTIIQSSSGVSSGGSSTPAKKR 936
            ::: .:.:...|..:...|::.:::....:|     |||  ..|.:::|::......::.||:..
 Worm   463 VEE-TTTEAEVPTTTVGYESEVVETTAADIP-----TTTIGYAPIVVESTTAADVPTTTVPAETT 521

  Fly   937 KYY--CKEGDKIPDQTSISSYFVCYKNAQGQMKGHK--MSCSKSLLFCPKTLMCTLASKCTD 994
            ...  |.||     .|:|......|||.   :.|.:  ..|...|.|.|:...|..|.:..:
 Worm   522 TEVPACVEG-----ATAIEPCSQHYKNC---VNGQEAIFICENGLFFSPEQARCAPADQIAE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42296NP_652638.2 ChtBD2 21..70 CDD:214696
CBM_14 784..828 CDD:426342 8/43 (19%)
cpg-1NP_001021159.1 CBM_14 61..113 CDD:426342 11/75 (15%)
rne <116..206 CDD:236766 26/109 (24%)
CBM_14 214..266 CDD:426342 10/79 (13%)
rne <321..499 CDD:236766 28/200 (14%)
CBM_14 <539..576 CDD:426342 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.