DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Clec4b1

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001177239.1 Gene:Clec4b1 / 69810 MGIID:1917060 Length:209 Species:Mus musculus


Alignment Length:160 Identity:41/160 - (25%)
Similarity:73/160 - (45%) Gaps:32/160 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 AQMDGY-----FSAINGV-----QCLQPGFEKIGDRYFYIEEDV--ELNWLDAQAKCRRMGGHLA 195
            :::|.|     ||..|.|     .|....::..|. :.|:...|  ..:|..::..|.|||.||.
Mouse    53 SELDRYHSLTCFSEGNMVSDKVWSCCPKDWKLFGS-HCYLVPTVFSSASWNKSEENCSRMGAHLV 116

  Fly   196 SIKTKQEFDAIVEKLDDSKSYFLGV-NENTKTGDFVSAASGKSCLYHE----WGPGEPHHNNDQE 255
            .|.:::|.|.|...||...:||:|: :...:...:|....     |.|    |..|||  ::|.|
Mouse   117 VIHSQEEQDFITGILDIHAAYFIGLWDTGHRQWQWVDQTP-----YEESVTFWHNGEP--SSDNE 174

  Fly   256 RCVSILRKLMHVG------NCTYEKRFICQ 279
            :||::..: .::|      :|..:::.:||
Mouse   175 KCVTVYYR-RNIGWGWNDISCNLKQKSVCQ 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 33/124 (27%)
Clec4b1NP_001177239.1 CLECT_DC-SIGN_like 78..204 CDD:153060 34/135 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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