DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Cd209c

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_006248854.1 Gene:Cd209c / 688951 RGDID:1582956 Length:240 Species:Rattus norvegicus


Alignment Length:118 Identity:31/118 - (26%)
Similarity:51/118 - (43%) Gaps:9/118 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GDRYFYIEEDVELNWLDAQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKSYFLGVNENTKTGDFV 230
            |:.||:  ...:.||.|:...||::|..|..:|:..| .:.:::....|.|...|..:.|.....
  Rat   119 GNCYFF--SKFQQNWKDSVTSCRKLGAQLVVVKSDDE-QSFLQQTSKEKGYAWMVLSDLKREGIW 180

  Fly   231 SAASGKSCLY---HEWGPGEPHHNND-QERCVSILRKLMHVGNCTYEKRFICQ 279
            ....|...|:   ..|..|||  ||: :|.|........:...||.:|.:||:
  Rat   181 HWVDGSHLLFSFTKYWNKGEP--NNEWEEDCAEFRGDGWNDAPCTNKKYWICK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 30/115 (26%)
Cd209cXP_006248854.1 CLECT_DC-SIGN_like 110..232 CDD:153060 31/118 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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