DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and SFTPA1

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001087239.2 Gene:SFTPA1 / 653509 HGNCID:10798 Length:263 Species:Homo sapiens


Alignment Length:135 Identity:37/135 - (27%)
Similarity:58/135 - (42%) Gaps:17/135 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GVQCLQPGFEKIGDRYFYIEEDVELNWLDA-QAKCRRMGGHLASIKTKQEFDAIVEKLDDSKSY- 216
            |...||.....:|::.|  ..:.:....|| |..|.|.||.:|..:..:|.:||...:....:| 
Human   138 GALSLQGSIMTVGEKVF--SSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTYA 200

  Fly   217 FLGVNENTKTGDFVSAASGKSCLYHEWGPGEPHHNNDQERCVSILRKLMHVG------NCTYEKR 275
            ::|:.|....||| ..:.|....|..|..||| ....:|:||.     |:..      ||.|.:.
Human   201 YVGLTEGPSPGDF-RYSDGTPVNYTNWYRGEP-AGRGKEQCVE-----MYTDGQWNDRNCLYSRL 258

  Fly   276 FICQY 280
            .||::
Human   259 TICEF 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 33/118 (28%)
SFTPA1NP_001087239.2 Collagen 43..115 CDD:189968
CLECT_collectin_like 151..263 CDD:153061 33/120 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5300
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.050

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