DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Clec10a

DIOPT Version :10

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:240 Identity:47/240 - (19%)
Similarity:92/240 - (38%) Gaps:37/240 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NTCTEILANEARKDQIQLNIQLDALKADVSN----IKASQLSKDEKLDRMEREQFAMHESLETIN 117
            ||..|:.|..:|.|.:|..|  ::||.:|.:    ::|.: ...:|:..:|.   .:.:..:|:.
  Rat    81 NTKAELQALASRGDSLQTGI--NSLKVEVDDHGQELQAGR-GLSQKVASLES---TVEKKEQTLR 139

  Fly   118 RYLTVKLDRTKLQLEAIKNTMDYMKAQMDGYFSAINGVQCLQPGFEKIGDRYFYIEEDVELNWLD 182
            ..|:...||.: ||.....|:....|.:....||:  ..|.....|..|..|::.:....  |.:
  Rat   140 TDLSEITDRVQ-QLGKDLKTLTCQLASLKNNGSAV--ACCPLHWMEHEGSCYWFSQSGKP--WPE 199

  Fly   183 AQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKSYFLGVNENTKTGDFVSAASGKSCLYHEWGPGE 247
            |...|:....:|.::.:..|.:.:...: .|...::|:.:......:|.....:....| |.|.:
  Rat   200 ADKYCQLENSNLVAVNSLAEQNFLQTHM-GSVVTWIGLTDQNGPWRWVDGTDYEKGFTH-WAPKQ 262

  Fly   248 P-----HHNNDQERCVSILRKLMHVGN--------CTYEKRFICQ 279
            |     |.....|.|.       |..:        |....|::|:
  Rat   263 PDNWYGHGLGGGEDCA-------HFTSDGRWNDDVCQRPYRWVCE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 20/124 (16%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106 22/91 (24%)
CLECT_DC-SIGN_like 176..301 CDD:153060 23/136 (17%)

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