DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and si:ch73-86n18.1

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001038504.2 Gene:si:ch73-86n18.1 / 564061 ZFINID:ZDB-GENE-141216-19 Length:263 Species:Danio rerio


Alignment Length:228 Identity:41/228 - (17%)
Similarity:87/228 - (38%) Gaps:31/228 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KDQIQLNIQLDALKADVSNIKASQLSKDEKLDRMEREQFAMHESLETINRYLTVKLDRTKLQLEA 133
            :.|:.|.:.:..|.:..:||....|..:.:...:..|.........|::..||...:|.......
Zfish    42 RGQVSLVLLIALLTSVCANIGLGVLLVNSRRSSISAEPVNSESEAATLSLKLTATQERFSRLCSE 106

  Fly   134 IKNTMDYMKAQMDGYFSAINGVQCLQP---GFEKIGDRYFYIEEDVELNWLDAQAKCRRMGGHLA 195
            ..|.         |...:.:.::| :|   .:..:.::.:|..:| :|:|..::..|..|||||.
Zfish   107 YTNL---------GQACSKSVIKC-RPCPEDWMHLSEKCYYFSDD-KLDWQHSKESCASMGGHLT 160

  Fly   196 SIKTKQE---FDAIVEKLDDSKSYF-LGVNENTKTG--DFVSAASGKSCLYHEWGPGEPHHNNDQ 254
            .:.:.::   .:|:.........:| :|:::....|  .:|.........::||   |...||.:
Zfish   161 ILHSHEQHHTLEAVARNHGGMDYHFWIGLSDTETEGVWKWVDNTVVNKTYWNEW---EKEPNNHR 222

  Fly   255 ------ERCVSI--LRKLMHVGNCTYEKRFICQ 279
                  |.|..:  ..|......|.:..:.||:
Zfish   223 SGGVHGEDCAVLDSRSKTWFDVPCDFHYKRICE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 26/125 (21%)
si:ch73-86n18.1NP_001038504.2 CLECT_DC-SIGN_like 124..256 CDD:153060 26/136 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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