DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Colec10

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001124013.1 Gene:Colec10 / 299928 RGDID:1307149 Length:277 Species:Rattus norvegicus


Alignment Length:164 Identity:39/164 - (23%)
Similarity:67/164 - (40%) Gaps:25/164 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LTVKLDRTKLQLEAIKNTMDYMKAQMDGYFSAINGVQCLQPGFEKIGDRYFYIEEDVELNWLDAQ 184
            |.:.:.|.|..::.|||.:                     .|..:..::::||.:: |.|:.::.
  Rat   131 LDISVARLKTSMKFIKNVI---------------------AGIRETEEKFYYIVQE-EKNYRESL 173

  Fly   185 AKCRRMGGHLASIKTKQEFDAIVEKLDDSKSY--FLGVNENTKTGDFVSAASGKSCLYHEWGPGE 247
            ..||..||.||..|.:.....|.:.:..|..:  |:|||:..|.|.:|...:.....|..|..||
  Rat   174 THCRIRGGMLAMPKDEVVNTLIADYVAKSGFFRVFIGVNDLEKEGQYVFTDNTPLQNYSNWKEGE 238

  Fly   248 PHHNNDQERCVSILRK-LMHVGNCTYEKRFICQY 280
            |......|.||.:|.. ..:...|.....|:|::
  Rat   239 PSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCEF 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 32/113 (28%)
Colec10NP_001124013.1 Collagen 45..94 CDD:189968
CLECT_collectin_like 157..272 CDD:153061 32/115 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5161
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100086
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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