DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Clec4a2

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001005880.1 Gene:Clec4a2 / 297584 RGDID:1359163 Length:235 Species:Rattus norvegicus


Alignment Length:184 Identity:46/184 - (25%)
Similarity:75/184 - (40%) Gaps:34/184 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 FAMHESLETINRYLTVKLDRTKLQLEAIKN---TMDYMKAQMDGYFSAINGVQCLQPGFEKIGDR 168
            |..:..|....:.||   |:|...|...||   |.|             ....|....::..|..
  Rat    69 FQKYSQLLEEKKALT---DKTLNDLNCTKNVSLTED-------------KACSCCLKDWKSFGSY 117

  Fly   169 YFYIEEDVELNWLDAQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKSYFLGVNENTKT-GDFVSA 232
            .::...|.:..|.:::.||.|||.||..|.::.|.|.|...|:....||:|::::::. ..::..
  Rat   118 CYFTSTDSKATWDESKEKCSRMGAHLLVIHSQDEQDFINTILNIGTDYFIGLSDHSENQWQWIDQ 182

  Fly   233 ASGKSCLYHE----WGPGEPHHNNDQERCVSILRKLMHVGN---CTYEKRFICQ 279
            ..     |:|    |..|||  ||.:|:||.|..:.....|   |....:.:||
  Rat   183 TP-----YNESVTFWHKGEP--NNKEEKCVVINHRDKWGWNDIPCHDRHKSVCQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 33/119 (28%)
Clec4a2NP_001005880.1 CLECT_DC-SIGN_like 107..229 CDD:153060 32/128 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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