DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24A and Clec4m

DIOPT Version :10

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:303 Identity:64/303 - (21%)
Similarity:112/303 - (36%) Gaps:72/303 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVLNLLLVSHEFSAGTAKIEIQPLPALCNGYCFPTLKPVMEYVAIHQDKWNTCTEILANEARKDQ 71
            |||.||  |..|.||...|.:           |...|..       ..:|.       .|.::::
  Rat    63 LVLQLL--SFLFLAGLLLIIL-----------FQVFKTT-------NTQWQ-------EEPKQEK 100

  Fly    72 I--QLNIQLDALKADVSNIKASQLSKDEKLDRMEREQFAMHESLETINRYLTVKLDRTKLQLEAI 134
            |  :||...|.|   :|.|..|| .::|.:.....||....: :|.::|....::....:| |.|
  Rat   101 ILEELNQLTDEL---MSRIPISQ-GQNESMQEKISEQLTQLK-VELLSRIPVFQVQNESMQ-EKI 159

  Fly   135 KNTMDYMKAQMDGYFSAINGVQCLQPGFEK---------------------------IGDRYFYI 172
            ...:..:||::   .|.|..:|......::                           :|:.||..
  Rat   160 SEQLTQLKAEL---LSKIPSLQVQDESKQEKIYQQLVQMKTELLRLCRLCPWDWTFLLGNCYFLS 221

  Fly   173 EEDVELNWLDAQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKS-YFLGVNE--NTKTGDFVSAAS 234
            :.  :.||.||...|:.....|..|.:.:| ...::....:|. .::|:::  |..|..:|..::
  Rat   222 KS--QRNWNDAVRACKEEKAQLVIINSDEE-QTFLQLTSKAKGPTWMGLSDLKNEATWLWVDGST 283

  Fly   235 GKSCLYHEWGPGEPHHNNDQERCVSILRKLMHVGNCTYEKRFI 277
            ..|.....|..||| :|..:|.||.......:...|..:|.:|
  Rat   284 LSSRFQKYWNRGEP-NNIGEEDCVEFAGDGWNDSKCELKKFWI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 27/112 (24%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 28/124 (23%)

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