DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24A and clec-185

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_502375.4 Gene:clec-185 / 182914 WormBaseID:WBGene00007729 Length:504 Species:Caenorhabditis elegans


Alignment Length:77 Identity:19/77 - (24%)
Similarity:37/77 - (48%) Gaps:15/77 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 CRRMGGHLASIKTKQEFDAIVEKLDDSKSYFLGVNENTKTGDFV--SAASGKSCLYHEWGPGEPH 249
            |....|.:.::.:|:| ::.|.::       .|.|:.|....::  :.:||    |..|.||:|.
 Worm   411 CTWCNGTMVTVSSKEE-NSFVSRV-------FGSNDETTRQIWIGNTESSG----YLNWSPGQPT 463

  Fly   250 HNND-QERCVSI 260
            ..|| .:.|:|:
 Worm   464 KPNDGLDYCISM 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 19/77 (25%)
clec-185NP_502375.4 CLECT 84..217 CDD:214480
CLECT 391..500 CDD:214480 19/77 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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