DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24A and si:ch73-111e15.1

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_005172686.1 Gene:si:ch73-111e15.1 / 101885260 ZFINID:ZDB-GENE-110411-28 Length:271 Species:Danio rerio


Alignment Length:186 Identity:42/186 - (22%)
Similarity:76/186 - (40%) Gaps:33/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 ETINRYLTVKLDRTKLQLEAIKNTMDYMK--AQMDGYFSAINGVQCLQPGFEKIGDRYFYIEEDV 176
            |..::.||...:.|:.:.|.:.|..:.:|  .|:......|.|....|..|       :|:..:.
Zfish    97 EERHQLLTKITNLTENKDELLTNIENLLKDREQLIQQHQIIAGWTYFQSSF-------YYLSNES 154

  Fly   177 ELNWLDAQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKSYFLGVNENTKTGDFVSAASGKSCLYH 241
            : :|.|::..|:.....|.:|..:||.| .|..|..:|.:::|:.::.|.|.: ....|.:....
Zfish   155 K-SWTDSRGDCKGRKADLITINNRQEQD-FVMTLTRNKEFWIGLTDSEKEGQW-KWVDGSTLTTG 216

  Fly   242 EWGP----GEPHHNNDQERCVSILRKLMH-------VG----NCTYEKRFICQYGI 282
            .|..    .|| :...:|.||     |.|       :|    ||....::||:..|
Zfish   217 FWASFRSITEP-NGGTRENCV-----LTHLKRHPELIGWIDHNCDASYQWICEKSI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 29/125 (23%)
si:ch73-111e15.1XP_005172686.1 CLECT_DC-SIGN_like 139..264 CDD:153060 32/140 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.