DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24A and dcsignlg

DIOPT Version :9

Sequence 1:NP_652637.1 Gene:lectin-24A / 53543 FlyBaseID:FBgn0040104 Length:282 Species:Drosophila melanogaster
Sequence 2:XP_002660626.3 Gene:dcsignlg / 100320246 ZFINID:ZDB-GENE-090313-154 Length:263 Species:Danio rerio


Alignment Length:212 Identity:45/212 - (21%)
Similarity:88/212 - (41%) Gaps:50/212 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 EREQFAMHE-SLETINRYLT------VKLDRTKLQLEAIKNTMDYMKAQMDGYFSAI-------- 152
            ||:.|..:: ::|.:|..::      ..|:..|.|||...|::...|.|::..::::        
Zfish    66 ERDLFKTYKNTVEELNHTISSLQHDNTDLETDKQQLEDKYNSLSLKKQQLETKYNSLSLGKQQLE 130

  Fly   153 NGVQCLQPGFEKIGDR--YFYIEEDVELNWLDAQAKCRRMGGHLASIKTKQEFDAIVEKLDDSKS 215
            |.|..|....::...:  :|::..:. ::|.:::..||..|..|..||:::            |.
Zfish   131 NRVTSLSAELKEARSKSGWFFMSTEA-MSWSESRQFCRDRGADLVIIKSEE------------KQ 182

  Fly   216 YFLG--VNENTKTGDFVSAASGKSCLYHE--------WGPGEPHHNNDQ---ERCVSILRKLMHV 267
            .|:.  |.|:|..|..|:...|....:.:        |..|||  ||.|   |.||.:.......
Zfish   183 RFISSLVKEDTWIGLSVTETGGNKWKWVDNSPLNQGFWAKGEP--NNYQGAKEDCVEVRISQGTP 245

  Fly   268 GN-----CTYEKRFICQ 279
            .|     |:..::.:|:
Zfish   246 NNWNDRRCSDSRKAVCE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24ANP_652637.1 CLECT 169..280 CDD:153057 29/129 (22%)
dcsignlgXP_002660626.3 IncA <40..>144 CDD:282066 16/77 (21%)
Uso1_p115_C 78..>146 CDD:282695 13/67 (19%)
CLECT_DC-SIGN_like 144..263 CDD:153060 29/134 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X29
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.