DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and colec10

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001276917.2 Gene:colec10 / 794040 ZFINID:ZDB-GENE-131127-525 Length:271 Species:Danio rerio


Alignment Length:195 Identity:37/195 - (18%)
Similarity:64/195 - (32%) Gaps:68/195 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 WKKIIAEDIENRTNRSELKMEGQLSDLQEALTSITTSLKNMSAKINILHRFKRIGSRYLHIEDIV 157
            ::|:|.:            |:..:|.::.|:..|...:..:....|:.         ||.:.:  
Zfish   113 YRKVIGQ------------MDASISKVKNAIKFIKKVVLGIRETENMF---------YLLVTE-- 154

  Fly   158 QQNWTSALSACQKMGGN------------LASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVF 210
            .:.:..:|..|:..||.            ||:.|.|||.|                      .||
Zfish   155 ARTYQQSLLNCKLRGGTLAMSRTEEKNNLLANFIREADLN----------------------HVF 197

  Fly   211 ISVSSGKRAPFLKWNPGEPL-------YEHVDQ---RCVSI-HNGGMWVASCTSDFKYICEANEN 264
            |.:.:|.......:..|.||       .:..|.   .||.: ..|.:....|.:...||||..:|
Zfish   198 IRLQAGVTEVGYMYLNGNPLLNTTAWAIQGADSGKGDCVQLGRTGALSQVDCGATQYYICEFVKN 262

  Fly   265  264
            Zfish   263  262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 9/66 (14%)
CLECT 160..260 CDD:153057 25/122 (20%)
colec10NP_001276917.2 None

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