DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and COLEC11

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001242914.1 Gene:COLEC11 / 78989 HGNCID:17213 Length:285 Species:Homo sapiens


Alignment Length:160 Identity:42/160 - (26%)
Similarity:76/160 - (47%) Gaps:13/160 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KMEGQLSDLQEALTSITTSLKNMSAKINILHRFKRIGSR-YLHIEDIVQQNWTSALSACQKMGGN 174
            |..|::.:....|||....:||..|.:      :...|: ||.:::  ::.:..|..:||..||.
Human   134 KAIGEMDNQVSQLTSELKFIKNAVAGV------RETESKIYLLVKE--EKRYADAQLSCQGRGGT 190

  Fly   175 LASIINEADFNAIVSQLSKDN--TYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQR 237
            |:...:||....:.:.|::..  ...|||:||.::|.|:.........|.||..|||...:.::.
Human   191 LSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEED 255

  Fly   238 CVSIHNGGMW-VASCTSDFKYICEAN-ENV 265
            ||.:...|.| ..:|.:...::||.: ||:
Human   256 CVEMVASGGWNDVACHTTMYFMCEFDKENM 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 7/22 (32%)
CLECT 160..260 CDD:153057 27/102 (26%)
COLEC11NP_001242914.1 Collagen 58..111 CDD:189968
CLECT_collectin_like 165..280 CDD:153061 31/116 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5300
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.960

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