DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Colec11

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001300907.1 Gene:Colec11 / 71693 MGIID:1918943 Length:278 Species:Mus musculus


Alignment Length:159 Identity:42/159 - (26%)
Similarity:76/159 - (47%) Gaps:9/159 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KMEGQLSDLQEALTSITTSLKNMSAKINILHRFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNL 175
            :|:.|::.|...|..|..:|.:.:|...:.....:|   ||.:::  ::.:..|..:||..||.|
Mouse   125 EMDNQVTQLTTELKFIKNALPSPAAVAGVRETESKI---YLLVKE--EKRYADAQLSCQARGGTL 184

  Fly   176 ASIINEADFNAIVSQLSKDN--TYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQRC 238
            :...:||....:.|.|::..  ...|||:||.::|.|:.........|.||..|||...:.::.|
Mouse   185 SMPKDEAANGLMASYLAQAGLARVFIGINDLEKEGAFVYSDRSPMQTFNKWRSGEPNNAYDEEDC 249

  Fly   239 VSIHNGGMW-VASCTSDFKYICEAN-ENV 265
            |.:...|.| ..:|.....::||.: ||:
Mouse   250 VEMVASGGWNDVACHITMYFMCEFDKENL 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 10/48 (21%)
CLECT 160..260 CDD:153057 28/102 (27%)
Colec11NP_001300907.1 Collagen 48..99 CDD:460189
CLECT_collectin_like 158..273 CDD:153061 32/119 (27%)
Blue background indicates that the domain is not in the aligned region.

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