DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Cd209f

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001418839.1 Gene:Cd209f / 688750 RGDID:1585258 Length:256 Species:Rattus norvegicus


Alignment Length:263 Identity:58/263 - (22%)
Similarity:100/263 - (38%) Gaps:54/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PSGCEETDRVVCQLEDPRNQCGPFCLEALMPLIGHIAQHQEQW-------------KTCKLQEIQ 72
            |:..||  .|..:..||.   |..|  :...|.||:.  :..|             ....|.:|.
  Rat    10 PNNHEE--EVTLEDHDPE---GLIC--SSKSLQGHLT--RAPWLLPLLISLGLFLLMLATLVQIS 65

  Fly    73 AQQRDIEKEIESQKTSLTESWKKIIAEDIENRTNRSELKMEGQLSDLQEALTSITTSLKNMSAKI 137
            ....:.:.:.:.||.|  .|:.|:.....:..|...      |:..:|:.||....||..:....
  Rat    66 RICANPQGQTQDQKGS--SSFGKVAVPQEQTYTGLE------QIQQIQQQLTQFNASLAGLCRPC 122

  Fly   138 NILHRFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQ-------LSKDN 195
            .....|.: ||.||....:.  :|.::.|:|:.:|.:|..:      |::..|       :.:..
  Rat   123 PWDWEFFQ-GSCYLFSRTLA--SWGASASSCKDLGAHLVIV------NSVAEQQFLKYWHIRQSQ 178

  Fly   196 TYMIGISDLAEKGVFISVSSGKRAPFLK---WNPGEPLYEHVDQRCVSIHNGGMWVASCTSDFKY 257
            ...||:||...:|.:..|..   .| ||   |..||| ....|:.||.|.......::|:::..:
  Rat   179 LTWIGLSDHQREGSWQWVDD---TP-LKLSFWKEGEP-NNAGDEDCVVIAEDKWNDSTCSANNFW 238

  Fly   258 ICE 260
            :||
  Rat   239 VCE 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 31/151 (21%)
CLECT 160..260 CDD:153057 25/109 (23%)
Cd209fNP_001418839.1 CLECT_DC-SIGN_like 122..241 CDD:153060 30/132 (23%)

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