DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Clec10a

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_008766090.1 Gene:Clec10a / 64195 RGDID:621158 Length:307 Species:Rattus norvegicus


Alignment Length:211 Identity:51/211 - (24%)
Similarity:86/211 - (40%) Gaps:41/211 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QEIQAQQRDIEKEIESQKTSLTESWKKIIAEDIENRTNRSELKMEGQLSDLQEALTSITTSLKNM 133
            ||:|| .|.:.:::.|.: |..|..::.:..|:...|:|.:     ||....:.||....||||.
  Rat   112 QELQA-GRGLSQKVASLE-STVEKKEQTLRTDLSEITDRVQ-----QLGKDLKTLTCQLASLKNN 169

  Fly   134 SAKINI--LHRFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNT 196
            .:.:..  ||..:..||.|...:.  .:.|..|...||....||.::.:.|:.|.:.:.:....|
  Rat   170 GSAVACCPLHWMEHEGSCYWFSQS--GKPWPEADKYCQLENSNLVAVNSLAEQNFLQTHMGSVVT 232

  Fly   197 YMIGISDL-----------AEKGVFISVSSGKRAPFLKWNPGEP--LYEH---VDQRCVSIHNGG 245
            : ||::|.           .|||            |..|.|.:|  .|.|   ..:.|....:.|
  Rat   233 W-IGLTDQNGPWRWVDGTDYEKG------------FTHWAPKQPDNWYGHGLGGGEDCAHFTSDG 284

  Fly   246 MWVAS-CTSDFKYICE 260
            .|... |...::::||
  Rat   285 RWNDDVCQRPYRWVCE 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 24/92 (26%)
CLECT 160..260 CDD:153057 25/116 (22%)
Clec10aXP_008766090.1 Lectin_N 5..166 CDD:461106 15/60 (25%)
CLECT_DC-SIGN_like 176..301 CDD:153060 32/140 (23%)

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