DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and si:dkey-9i23.4

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001139080.1 Gene:si:dkey-9i23.4 / 571855 ZFINID:ZDB-GENE-090313-363 Length:189 Species:Danio rerio


Alignment Length:111 Identity:30/111 - (27%)
Similarity:53/111 - (47%) Gaps:13/111 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 NWTSALSACQKMG--GNLASIINEADFNAIVSQLSKDN----TYMIGISDLAEKGVFISVSSGKR 218
            |:|.|..:|:...  .:|.|:.|..|.:.::..:.|.|    ...:|..:|.:.|.|..: .|..
Zfish    68 NFTEAEFSCRTKAPRAHLVSVHNSQDNSNLLCIVKKFNPKSLRIWLGAYELFQSGEFFWL-DGSF 131

  Fly   219 APFLKWNPGEP--LYEHVDQRCVSIH--NGGMW-VASCTSDFKYIC 259
            ..|.:|.||||  :|.:.:: ||.::  ..|.| .|:|:....:||
Zfish   132 WNFNQWVPGEPNHMYTYTEE-CVEMNWREIGKWNDATCSVKKSFIC 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 30/111 (27%)
CLECT 160..260 CDD:153057 30/111 (27%)
si:dkey-9i23.4NP_001139080.1 CLECT 58..176 CDD:153057 28/109 (26%)

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