DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Clec4n

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_064385.1 Gene:Clec4n / 56620 MGIID:1861231 Length:209 Species:Mus musculus


Alignment Length:130 Identity:40/130 - (30%)
Similarity:61/130 - (46%) Gaps:17/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 HRFKRIGSRYLHIEDIVQQN-WTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDL 204
            :.:|..||....|.  .::| |:::...|.:||.:|..|..||:.|.|..||::..:|.:|:||.
Mouse    81 NHWKSFGSSCYLIS--TKENFWSTSEQNCVQMGAHLVVINTEAEQNFITQQLNESLSYFLGLSDP 143

  Fly   205 AEKGVFISVSSGKRAPFLK----WNPGEPLYEHVDQRCVSI--HNGGMW---VASCTSDFKYICE 260
            ...|.:..:..   .||.:    |:|.||  ...::|||||  .|...|   ...|.|....|||
Mouse   144 QGNGKWQWIDD---TPFSQNVRFWHPHEP--NLPEERCVSIVYWNPSKWGWNDVFCDSKHNSICE 203

  Fly   261  260
            Mouse   204  203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 4/18 (22%)
CLECT 160..260 CDD:153057 34/109 (31%)
Clec4nNP_064385.1 CLECT_DC-SIGN_like 79..204 CDD:153060 40/130 (31%)

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