DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and si:dkey-241l7.5

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001231960.1 Gene:si:dkey-241l7.5 / 565442 ZFINID:ZDB-GENE-041014-237 Length:153 Species:Danio rerio


Alignment Length:145 Identity:36/145 - (24%)
Similarity:64/145 - (44%) Gaps:16/145 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LTSITTSLKNM-SAKINILHRFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNA 186
            |.||..|::.. ..:::....:.|.|||...... ...||.:|...||.:||||||:.::.:.:.
Zfish    10 LLSIVFSMEGADEERLSCERGWSRSGSRCFRFFS-RSVNWVTAERNCQSLGGNLASVHDQVENDF 73

  Fly   187 IVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQRCVSIHNGGMWVAS- 250
            ::|.:.......||..|..:.|.:: .|.|....:..|..|||  ....:.|:.|:    |.:: 
Zfish    74 LLSLVPGSTRCWIGGHDGEQDGQWL-WSDGSVYGYTNWCSGEP--SSGSEHCLEIN----WTSNH 131

  Fly   251 ------CTSDFKYIC 259
                  |::...|:|
Zfish   132 CWNNQGCSTRMGYLC 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 4/11 (36%)
CLECT 160..260 CDD:153057 28/107 (26%)
si:dkey-241l7.5NP_001231960.1 CLECT 27..146 CDD:214480 31/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100086
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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