DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-28C and lectin-46Ca

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster


Alignment Length:123 Identity:38/123 - (30%)
Similarity:57/123 - (46%) Gaps:13/123 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 YLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIV----SQLSKDNTYMIGISDLAEKGVF 210
            |:.|:.|   ||..|.:.|.:.|.|||.:....||.|:|    ||:..|: :..|.:||..:|.|
  Fly    46 YVGIKKI---NWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDD-FWFGGNDLQSEGRF 106

  Fly   211 ISVSSGKRAPFL-KWNPGEPLYEHVDQRCVSIH-NGGMWV---ASCTSDFKYICEANE 263
            ..:||||...:: ..|..||........|:.|. ...:.|   .:|.....:|||.|:
  Fly   107 KYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFICEQNQ 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 3/9 (33%)
CLECT 160..260 CDD:153057 32/108 (30%)
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 36/119 (30%)

Return to query results.
Submit another query.