DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-28C and lectin-46Cb

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001163102.1 Gene:lectin-46Cb / 53522 FlyBaseID:FBgn0040092 Length:322 Species:Drosophila melanogaster


Alignment Length:104 Identity:30/104 - (28%)
Similarity:50/104 - (48%) Gaps:16/104 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 LKNMSAKINILHRFKRIGS------RYL-------HIEDIVQQNWTSALSACQKMGGNLASIINE 181
            |..:.|.::||.|.:.:||      |||       :...:.:.||..||:.|.:.|..||.:.|:
  Fly     5 LTALVALLSILPRGELLGSGPPCPRRYLRRINGKCYYFSVKKMNWFGALNNCLRKGLTLADLSNQ 69

  Fly   182 ADFNAIV---SQLSKDNTYMIGISDLAEKGVFISVSSGK 217
            .||:..:   |.|.....:..|.:||..:|.|..:|:|:
  Fly    70 RDFDGAIGFLSGLGNTEDFWFGGNDLYHEGRFQYISNGR 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 10/42 (24%)
CLECT 160..260 CDD:153057 20/61 (33%)
lectin-46CbNP_001163102.1 CLECT 38..155 CDD:153057 20/71 (28%)

Return to query results.
Submit another query.