DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and colec10

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001011227.1 Gene:colec10 / 496663 XenbaseID:XB-GENE-945586 Length:275 Species:Xenopus tropicalis


Alignment Length:153 Identity:40/153 - (26%)
Similarity:73/153 - (47%) Gaps:10/153 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KMEGQLSDLQEALTSITTSLKNMSAKINILHRFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNL 175
            |:.||| |:..|  .:.:|||.:.   |::...:....:|.:|.. .::|:..||:.|:..||.|
 Frog   124 KVVGQL-DVNVA--HLKSSLKFVK---NVIAGIRETDEKYYYIVR-EERNYRDALTQCRIRGGTL 181

  Fly   176 ASIINEADFNAIVSQLSKDNTY--MIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQRC 238
            |...::|..:.|...:||...:  .|||:|:.::..|:...:.....:..|..|||......:.|
 Frog   182 AMPKDQATNSLIADYISKMGLFRVFIGINDIEKEKQFVYADNSPLQTYSSWKAGEPNDGSGYEDC 246

  Fly   239 VSIHNGGMW-VASCTSDFKYICE 260
            |.:.:.|.| ...|:....::||
 Frog   247 VEMLSTGHWNDVDCSLTIYFVCE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 9/22 (41%)
CLECT 160..260 CDD:153057 26/102 (25%)
colec10NP_001011227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..76
CLECT_collectin_like 155..270 CDD:153061 30/116 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9757
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm72280
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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