DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and clec10a

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_012815686.1 Gene:clec10a / 496661 XenbaseID:XB-GENE-947983 Length:338 Species:Xenopus tropicalis


Alignment Length:313 Identity:59/313 - (18%)
Similarity:103/313 - (32%) Gaps:109/313 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PRNQCGP---FC------LEALMPLIGHIAQHQEQWKTCKLQEIQAQQRDIEKEIESQKTSLTES 92
            |.|...|   ||      |..::.||.|.     |....|.:.::.|..:....::|..:.||:.
 Frog    43 PSNSSRPLYGFCCLFAVLLVVIVILIVHF-----QKPEIKDRSLEYQLGNFSVSVKSHVSQLTQD 102

  Fly    93 WKKIIAEDIENRTN----RSELKMEGQLSDLQ------------------------EALTSITTS 129
            ..:::.:..|..|:    ::||.:....||:|                        |.||.:..|
 Frog   103 GTRLMDKITELETSVKKIQNELSLGSLQSDMQRVLGTLGRLVDRVQTLQVNDTRLMEKLTELEGS 167

  Fly   130 LKNMSAKINI----------LHRFKRIGSRYLHI------EDIVQQN-----------------W 161
            :|.....:.|          |....::..|..::      |.:...|                 |
 Frog   168 VKKFQGTLTIGTLQSDMQKVLGTLSKLVDRVQNLQVNGSQEPLCPDNWHRFTLSCYYVSKSGYPW 232

  Fly   162 TSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAPFLKWNP 226
            ..|...|:.:..:|. :||..|....|..::|.....||::|          |.|:    .||..
 Frog   233 EEAKKRCEGLSAHLV-VINNEDEQEYVFGIAKGQFTWIGLTD----------SEGE----WKWLD 282

  Fly   227 GEP--------LYEHVD----------QRCVSIHNGGMWVAS-CTSDFKYICE 260
            |.|        :.:..|          :.|..:|..|.|... |:..:::|||
 Frog   283 GTPYNTSPKFWIADQPDNYFGHGLGGGEDCAHLHYNGQWNDDHCSRRYRFICE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 31/175 (18%)
CLECT 160..260 CDD:153057 26/135 (19%)
clec10aXP_012815686.1 PqiB <91..201 CDD:442245 18/109 (17%)
CLECT_DC-SIGN_like 211..336 CDD:153060 28/140 (20%)

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