DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and colec11

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_009291466.1 Gene:colec11 / 492459 ZFINID:ZDB-GENE-041114-11 Length:277 Species:Danio rerio


Alignment Length:178 Identity:46/178 - (25%)
Similarity:82/178 - (46%) Gaps:28/178 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KKIIAE-DIENRTNRSELKMEGQLSDLQEALTS--ITTSLKNMSAKINILHRFKRIGSRYLHIED 155
            :|:|.| ||:      .:::..:|..::.||.|  ....:|...:|:            ||.:::
Zfish   119 RKMIGEMDIQ------VVQLTNELKFIKNALPSPAAVAGIKETDSKV------------YLLVKE 165

  Fly   156 IVQQNWTSALSACQKMGGNLASIINEADFNAI---VSQLSKDNTYMIGISDLAEKGVFISVSSGK 217
              ::.:..|...||..||:||...:.|...||   |:.......| |||:||..:|.|:.|....
Zfish   166 --EKRYREAEVFCQGRGGHLAMPKDAAANRAIAGYVTDAGLSRVY-IGINDLEREGHFVYVERSP 227

  Fly   218 RAPFLKWNPGEPLYEHVDQRCVSIHNGGMWV-ASCTSDFKYICEANEN 264
            ...|.:|..|||...:.|:.||.:.:.|.|: .:|.....::||.:::
Zfish   228 MTTFSRWREGEPNNAYDDEDCVEMVSSGEWIDVACQLTMYFVCEFDKD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 10/42 (24%)
CLECT 160..260 CDD:153057 31/103 (30%)
colec11XP_009291466.1 Collagen 44..102 CDD:189968
CLECT_collectin_like 157..272 CDD:153061 35/129 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5252
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.960

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