DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-28C and ASGR1

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001662.1 Gene:ASGR1 / 432 HGNCID:742 Length:291 Species:Homo sapiens


Alignment Length:229 Identity:44/229 - (19%)
Similarity:88/229 - (38%) Gaps:53/229 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EIQAQQRDIEKEIESQKTSLTESWKKIIAE---DIENRTNRSELKMEGQLSDLQEALTSI----- 126
            ::|.:.|.: :|..|..|:.||:..|.::.   ::..:....|.::|.|..||.|..:|:     
Human    65 QLQEELRGL-RETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVK 128

  Fly   127 --TTSLKNMSAKINIL---------------------HRFKRIGSRYLHIEDIVQQNWTSALSAC 168
              .:.|:::|.::..|                     :.|.|.|           :.|..|.:.|
Human   129 QFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSG-----------KAWADADNYC 182

  Fly   169 QKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISV-SSGKRAPFLKWNPGEP--L 230
            :....:|..:.:..:...:...:...||:| |:.|  :.|.:..| .:.....|..|.|.:|  .
Human   183 RLEDAHLVVVTSWEEQKFVQHHIGPVNTWM-GLHD--QNGPWKWVDGTDYETGFKNWRPEQPDDW 244

  Fly   231 YEH---VDQRCVSIHNGGMWVAS-CTSDFKYICE 260
            |.|   ..:.|....:.|.|... |...::::||
Human   245 YGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 21/120 (18%)
CLECT 160..260 CDD:153057 21/106 (20%)
ASGR1NP_001662.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Lectin_N 4..144 CDD:461106 17/79 (22%)
Endocytosis signal. /evidence=ECO:0000255 5..8
CLECT_DC-SIGN_like 154..279 CDD:153060 26/139 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.