DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and MBL2

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_000233.1 Gene:MBL2 / 4153 HGNCID:6922 Length:248 Species:Homo sapiens


Alignment Length:119 Identity:34/119 - (28%)
Similarity:60/119 - (50%) Gaps:7/119 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 KRIGSR-YLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEK 207
            |::|:: :|...:|:......||  |.|...::|:..|.|: |..:..|.|:..: :||:|...:
Human   132 KQVGNKFFLTNGEIMTFEKVKAL--CVKFQASVATPRNAAE-NGAIQNLIKEEAF-LGITDEKTE 192

  Fly   208 GVFISVSSGKRAPFLKWNPGEPLYEHVDQRCVSIHNGGMW-VASCTSDFKYICE 260
            |.|:.: :|.|..:..||.|||.....|:.||.:...|.| ...|::....:||
Human   193 GQFVDL-TGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200
CLECT 160..260 CDD:153057 28/100 (28%)
MBL2NP_000233.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..113
CLECT_collectin_like 136..246 CDD:153061 32/115 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11773
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5300
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.960

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