DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Cd209d

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001102319.1 Gene:Cd209d / 363856 RGDID:1561104 Length:237 Species:Rattus norvegicus


Alignment Length:119 Identity:33/119 - (27%)
Similarity:56/119 - (47%) Gaps:11/119 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GSRYLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDN--TYMIGISDLAEKGV 209
            ||.|...:.  |:||.::::||:::|..|. |:...:....:.|.||..  |:| |:||:..:..
  Rat   115 GSCYFFSKS--QRNWHNSITACKELGAQLV-IVETDEEQTFLQQTSKTRGPTWM-GLSDMHNEAT 175

  Fly   210 FISVSSGKRAPFLK--WNPGEPLYEHV-DQRCVSIHNGGMWVASCTSDFKYICE 260
            :..|.....:|...  ||.|||  .:| |:.|......|.....|.:...:||:
  Rat   176 WHWVDGSPLSPSFAQYWNRGEP--NNVGDEDCAEFSGDGWNDLRCDTRIFWICK 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 4/12 (33%)
CLECT 160..260 CDD:153057 28/104 (27%)
Cd209dNP_001102319.1 CLECT_DC-SIGN_like 106..228 CDD:153060 33/119 (28%)

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