DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Cd209a

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001099374.1 Gene:Cd209a / 288375 RGDID:1308239 Length:240 Species:Rattus norvegicus


Alignment Length:111 Identity:29/111 - (26%)
Similarity:50/111 - (45%) Gaps:5/111 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 IVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISV-SSGKRA 219
            :.|::|..:.:||..:|..|..|.:|.:.|.:.....|.....:|:.|:.::..:..| .|....
  Rat   126 VAQKSWNDSATACHNVGAQLVVIKSEEEQNFLQKTSKKRGYTWMGLIDINKESTWHWVDGSPLTL 190

  Fly   220 PFLK-WNPGEPLYEHV-DQRCVSIHNGGMWVASCTSDFKYICEANE 263
            .|:| ||.|||  .:| |:.|......|.....|.:...:||:..|
  Rat   191 TFMKYWNKGEP--NNVGDKDCAEFREDGWNDTKCDNKKFWICKKPE 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 1/3 (33%)
CLECT 160..260 CDD:153057 26/102 (25%)
Cd209aNP_001099374.1 CLECT_DC-SIGN_like 110..232 CDD:153060 28/107 (26%)

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