DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Sftpd

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_033186.1 Gene:Sftpd / 20390 MGIID:109515 Length:374 Species:Mus musculus


Alignment Length:163 Identity:39/163 - (23%)
Similarity:70/163 - (42%) Gaps:15/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LKMEGQLSD---LQEALTSITTSLKNMSA------KINILHRFKRIGSRYLHIEDIVQQNWTSAL 165
            :|.|..|.|   |::.:.::...|:.:..      |..:....:.:|.:.....| .::.:..|.
Mouse   214 IKGESGLPDSAALRQQMEALKGKLQRLEVAFSHYQKAALFPDGRSVGDKIFRTAD-SEKPFEDAQ 277

  Fly   166 SACQKMGGNLASIINEADFNAIVSQL--SKDNTYMIGISDLAEKGVFISVSSGKRAPFLKWNPGE 228
            ..|::.||.||| ...|..||.:.||  :.:....:.::|:..:|.| :..:|:...:..|.|||
Mouse   278 EMCKQAGGQLAS-PRSATENAAIQQLITAHNKAAFLSMTDVGTEGKF-TYPTGEPLVYSNWAPGE 340

  Fly   229 PLYEHVDQRCVSIHNGGMW-VASCTSDFKYICE 260
            |......:.||.|...|.| ..:|......|||
Mouse   341 PNNNGGAENCVEIFTNGQWNDKACGEQRLVICE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 9/58 (16%)
CLECT 160..260 CDD:153057 28/102 (27%)
SftpdNP_033186.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..222 3/7 (43%)
gly_rich_SclB <60..>219 CDD:468478 2/4 (50%)
Surfac_D-trimer 223..267 CDD:286141 4/43 (9%)
CLECT_collectin_like 261..374 CDD:153061 31/116 (27%)

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