DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-28C and Reg1

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_033068.1 Gene:Reg1 / 19692 MGIID:97895 Length:165 Species:Mus musculus


Alignment Length:122 Identity:32/122 - (26%)
Similarity:53/122 - (43%) Gaps:17/122 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 YLHIEDIVQQNWTSALSACQKM-GGNLASIINEADFNAIVSQLSKDNT----YMIGISDLAEKGV 209
            |...||  :..|..|...||.| .|.|.|::::|:.|.:.|.:.:..|    ...|:.| .::..
Mouse    47 YYFTED--RLTWADADLFCQNMNSGYLVSVLSQAEGNFVASLIKESGTTDANVWTGLHD-PKRNR 108

  Fly   210 FISVSSGKRAPFLKWNPGEPLYEHVDQR--CVSI-HNGG--MWV-ASCTSDFKYICE 260
            ....|||....:..|..|.|   :...|  |||: .|.|  .|. .:|.:.:.::|:
Mouse   109 RWHWSSGSLFLYKSWATGSP---NSSNRGYCVSLTSNTGYKKWKDDNCDAQYSFVCK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 3/9 (33%)
CLECT 160..260 CDD:153057 28/110 (25%)
Reg1NP_033068.1 CLECT 35..163 CDD:470576 32/122 (26%)

Return to query results.
Submit another query.