DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and clec-48

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_507547.1 Gene:clec-48 / 180188 WormBaseID:WBGene00007565 Length:321 Species:Caenorhabditis elegans


Alignment Length:101 Identity:31/101 - (30%)
Similarity:42/101 - (41%) Gaps:13/101 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 CQKMGGNLASIINEADFNAIV-----SQLSKDN--TYMIGISDLAEKGVFISVSSGKRAPFLKWN 225
            |..:||:|||:.|..: ||::     :...|.|  .|.||.:||...|.:..........:..|.
 Worm    50 CNLLGGHLASVQNGQE-NALLQSNAANSFKKSNYSDYWIGANDLETSGTWKWTDPSVTFDYSNWQ 113

  Fly   226 PGEPLYEHVDQRCVSIHNG-GMWVA-SCTSDFKYIC 259
            .|||   .....|.....| |.|.| .|||...|:|
 Worm   114 LGEP---QSGSDCAIQDKGDGTWSAIGCTSYRPYLC 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474
CLECT 160..260 CDD:153057 31/101 (31%)
clec-48NP_507547.1 CLECT 26..146 CDD:214480 30/99 (30%)
CLECT 182..315 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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