DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Mrc2

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_006532469.1 Gene:Mrc2 / 17534 MGIID:107818 Length:1513 Species:Mus musculus


Alignment Length:107 Identity:32/107 - (29%)
Similarity:51/107 - (47%) Gaps:5/107 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 QQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKD-NTYMIGISDLAEKGVFISVSSGKRAPF 221
            :::|..:..||.:.||:|.||.:.|:...|..|:.:: ....||::||..:..| ..|.|....|
Mouse   434 KRSWQESKRACLRGGGDLLSIHSMAELEFITKQIKQEVEELWIGLNDLKLQMNF-EWSDGSLVSF 497

  Fly   222 LKWNPGEP-LYEHVDQRCVSIHN-GGMWVAS-CTSDFKYICE 260
            ..|:|.|| .:....:.||:|.. .|.|..| |......||:
Mouse   498 THWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQSLPSICK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 0/1 (0%)
CLECT 160..260 CDD:153057 31/103 (30%)
Mrc2XP_006532469.1 beta-trefoil_Ricin_MRC2 76..199 CDD:467786
FN2 214..262 CDD:128373
CLECT 281..395 CDD:153057
CLECT 416..539 CDD:214480 31/105 (30%)
CLECT 555..678 CDD:214480
CLECT 703..843 CDD:214480
CLECT 863..985 CDD:214480
CLECT 1006..1142 CDD:214480
CLECT 1165..1277 CDD:214480
CLECT 1294..1427 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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