DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Ly75

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_038853.2 Gene:Ly75 / 17076 MGIID:106662 Length:1723 Species:Mus musculus


Alignment Length:234 Identity:44/234 - (18%)
Similarity:78/234 - (33%) Gaps:98/234 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GPFCLEALMPLIGHIAQHQEQWKTCKLQEIQAQQRDIEKEIESQKTSLTESWKKIIAEDIENRTN 106
            ||:|...|.      .::.::|..|.|.|                :....:|:|           
Mouse   191 GPWCATTLS------YEYDQKWGICLLPE----------------SGCEGNWEK----------- 222

  Fly   107 RSELKMEGQLSDLQEALTSITTSLKNMSAKINILHRFKRIGSRY-LHIEDIVQQNWTSALSACQK 170
                                                .::|||.| .:.::|:  :|..|..:||.
Mouse   223 ------------------------------------NEQIGSCYQFNNQEIL--SWKEAYVSCQN 249

  Fly   171 MGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISV-----------SSGKRAPFLKW 224
            .|.:|.||.:.|:.           .|:.|..|:| :.|::.:           |..:...||.|
Mouse   250 QGADLLSIHSAAEL-----------AYITGKEDIA-RLVWLGLNQLYSARGWEWSDFRPLKFLNW 302

  Fly   225 NPGEPLYEHV-DQRCVSIH-NGGMWVA-SCTSDFKYICE 260
            :||.|:...: ...|..:. ..|:|.: ||.|...|:|:
Mouse   303 DPGTPVAPVIGGSSCARMDTESGLWQSVSCESQQPYVCK 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 15/118 (13%)
CLECT 160..260 CDD:153057 28/113 (25%)
Ly75NP_038853.2 beta-trefoil_Ricin_MRC-like 32..145 CDD:483961
FN2 162..209 CDD:128373 5/23 (22%)
CLECT 216..341 CDD:214480 35/185 (19%)
CLECT 361..486 CDD:214480
CLECT 501..624 CDD:214480
CLECT 643..791 CDD:214480
CLECT 821..933 CDD:153057
CLECT 952..1091 CDD:214480
Lectin_C 1122..1223 CDD:459655
CLECT 1240..1363 CDD:214480
CLECT 1407..1514 CDD:153057
CLECT 1540..1661 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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