DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and Asgr2

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001300854.1 Gene:Asgr2 / 11890 MGIID:88082 Length:301 Species:Mus musculus


Alignment Length:273 Identity:56/273 - (20%)
Similarity:97/273 - (35%) Gaps:67/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PRNQCGPFCLEALMPLIGHI-------------AQHQEQWKTCK----------LQEIQAQQRDI 78
            |:..|..|.| :|:.|..:|             .|.||:::|.|          |.|..|..   
Mouse    50 PQRLCSTFRL-SLLALAFNILLLVVICVVSSQSIQLQEEFRTLKETFSNFSSSTLMEFGALD--- 110

  Fly    79 EKEIESQKTSLTESWKKIIAEDIENRTNRSELKMEGQLSDLQEALTSITTSLKNMSAKINILH-- 141
              .:.....::..||...:.|      .:.:||.:.  |.|...|......|:.::.::....  
Mouse   111 --TLGGSTNAILTSWLAQLEE------KQQQLKADH--STLLFHLKHFPMDLRTLTCQLAYFQSN 165

  Fly   142 ----------RFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNLASIIN---EADFNAIVSQLSK 193
                      .|.  ||.|....|.:  .|..|...||....:|. :||   |.||  :|...|:
Mouse   166 GTECCPVNWVEFG--GSCYWFSRDGL--TWAEADQYCQLENAHLL-VINSREEQDF--VVKHRSQ 223

  Fly   194 DNTYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEP--LYEHVD---QRCVSIHNGGMWVAS-CT 252
            .:.: ||::|......::. .:..|:.:..|...:|  ...|..   :.|..|.:.|.|..: |.
Mouse   224 FHIW-IGLTDRDGSWKWVD-GTDYRSNYRNWAFTQPDNWQGHEQGGGEDCAEILSDGHWNDNFCQ 286

  Fly   253 SDFKYICEANENV 265
            ...:::||...|:
Mouse   287 QVNRWVCEKRRNI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 24/119 (20%)
CLECT 160..260 CDD:153057 24/108 (22%)
Asgr2NP_001300854.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Lectin_N 29..162 CDD:281887 24/125 (19%)
CLECT_DC-SIGN_like 170..295 CDD:153060 30/133 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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