DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-28C and CLEC10A

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_011521915.1 Gene:CLEC10A / 10462 HGNCID:16916 Length:319 Species:Homo sapiens


Alignment Length:244 Identity:50/244 - (20%)
Similarity:89/244 - (36%) Gaps:69/244 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KLQEIQAQQRDIEKEIESQKTSLTESWKKI----IAEDIENRTNRSE------------------ 109
            ::|.:.:|...:|:.|.|.|..: |.:|:.    ::|..|:.|.::.                  
Human    86 EIQALTSQGSSLEETIASLKAEV-EGFKQERQAGVSELQEHTTQKAHLGHCPHCPSVCVPVHSEM 149

  Fly   110 -LKMEGQLSDLQEALTSITT--------SLKNMSAKIN-ILHR-----FKRIGSRYLHIEDIVQQ 159
             |:::..:.||::....:.|        |.:.....:| :.|:     |...|           .
Human   150 LLRVQQLVQDLKKLTCQVATLNNNGEEASTEGTCCPVNWVEHQDSCYWFSHSG-----------M 203

  Fly   160 NWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAP-FLK 223
            :|..|...||....:|..|.:..:.|.:...|....|:| |:||  .:|.:..|.....|. |..
Human   204 SWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWM-GLSD--PEGAWKWVDGTDYATGFQN 265

  Fly   224 WNPGEPLYEHVD----------QRCVSIHNGGMWVAS-CTSDFKYICEA 261
            |.||:|     |          :.|...|..|.|... |...:.::|||
Human   266 WKPGQP-----DDWQGHGLGGGEDCAHFHPDGRWNDDVCQRPYHWVCEA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 20/129 (16%)
CLECT 160..260 CDD:153057 27/111 (24%)
CLEC10AXP_011521915.1 Lectin_N 5..170 CDD:461106 14/84 (17%)
CLECT_DC-SIGN_like 184..308 CDD:153060 31/142 (22%)

Return to query results.
Submit another query.