DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and clec4m

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_017948020.2 Gene:clec4m / 100497637 XenbaseID:XB-GENE-6043650 Length:225 Species:Xenopus tropicalis


Alignment Length:215 Identity:53/215 - (24%)
Similarity:94/215 - (43%) Gaps:34/215 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QQRDIEKEIESQKTSLTESWKKIIAEDI---------------ENRTNRSELKMEG---QLSDLQ 120
            ::.|||.....:|:.|.:...|.:...:               .::.:.|...||.   :.|:|:
 Frog    10 ERLDIELNHSDKKSPLYQRRSKYLIYSLLALSYILILTLFIMFLSKASNSGASMESKSKEYSELK 74

  Fly   121 EALTSITTSLKNM---SAKINILHRFKRI-GSRYLHIEDIVQQNWTSALSACQKMGGNLASII-- 179
            ..::.:...||.:   |.:.|....:|.. ||.|...:.|:  .|..|.:.|.|...:||.|.  
 Frog    75 NNVSVLVYKLKQLEETSQRSNCDSGWKEFNGSCYYFSKSIM--GWNKARALCLKKESDLAVITSE 137

  Fly   180 NEADFNAIVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAPFLK-WNPGEPLYEHV-DQRCVSIH 242
            ||.||   :.:.::|:.|.||:||..::|.::.|.....:...| |..||| .:|: ::.|..:.
 Frog   138 NEQDF---LYETTQDDRYWIGLSDTDQEGAWVWVDGTDYSTSYKFWKEGEP-NDHLNNEDCAHMW 198

  Fly   243 NGGMW-VASCTSDFKY-ICE 260
            ..|.| ...|:..:.| |||
 Frog   199 THGEWNDVPCSYSYCYAICE 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 20/107 (19%)
CLECT 160..260 CDD:153057 31/105 (30%)
clec4mXP_017948020.2 CLECT_DC-SIGN_like 96..219 CDD:153060 38/129 (29%)

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