DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and si:ch73-343l4.8

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_002660625.1 Gene:si:ch73-343l4.8 / 100320176 ZFINID:ZDB-GENE-090313-159 Length:170 Species:Danio rerio


Alignment Length:196 Identity:38/196 - (19%)
Similarity:68/196 - (34%) Gaps:64/196 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 IAEDIENRTNRSELKMEGQLSDLQEALTSITTSLKN---MSAKINILHRFKRIGSRYLHIEDIVQ 158
            |.|::|      ::|.||:....:.:...:.|.:..   :...:.::.:..|.||..|.:..|..
Zfish     6 IYENVE------DVKDEGKAQQNRRSCLMLATVILGTICVILLVFVILQHTRAGSNRLGLFFISN 64

  Fly   159 --QNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAPF 221
              .:|:.:...|:..|.:|. |||..:....:|...:|..: ||::|...:|            .
Zfish    65 NTMSWSESRQFCRDRGADLV-IINTEEKQRFISPFVEDFLW-IGLTDEEIEG------------N 115

  Fly   222 LKWNPGEPLYEHVDQRCVSIHNGGMWV---------------------------ASCTSDFKYIC 259
            :||....||.:            |.||                           ..||..||.:|
Zfish   116 MKWVDNSPLKQ------------GFWVDGEPNNLNGENCVIIVPVENFLKNWNDVPCTFTFKALC 168

  Fly   260 E 260
            |
Zfish   169 E 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 12/67 (18%)
CLECT 160..260 CDD:153057 24/126 (19%)
si:ch73-343l4.8XP_002660625.1 CLECT_DC-SIGN_like 48..170 CDD:153060 31/148 (21%)

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