DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and si:ch211-125e6.12

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001103299.1 Gene:si:ch211-125e6.12 / 100126100 ZFINID:ZDB-GENE-070912-36 Length:152 Species:Danio rerio


Alignment Length:130 Identity:37/130 - (28%)
Similarity:64/130 - (49%) Gaps:15/130 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 RFKRIGSRYLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAE 206
            :::|.|||...:.. ...||.:|...||::||||||::|:.:.:.::|.:.....:.||..::.|
Zfish    28 QWRRSGSRCFRLFS-TSVNWATAEKNCQRLGGNLASVLNDVENDFLLSLIPNSKRFFIGGYNVDE 91

  Fly   207 KGVFISVSSGKRAPFLKWNPGEPLYEHVDQRCVSIHNGGMWVAS-------CTSDFKYICEANEN 264
            :..|  .|.|....:..|..|||...:. :.|:.|:    |.|:       |:.:..|||..|.|
Zfish    92 QNWF--WSDGSPFGYTNWCSGEPNNMNT-EHCLEIN----WTANRCWNNLPCSVELGYICAKNLN 149

  Fly   265  264
            Zfish   150  149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200
CLECT 160..260 CDD:153057 30/106 (28%)
si:ch211-125e6.12NP_001103299.1 CLECT 35..146 CDD:153057 32/118 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100086
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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