DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and mbl2

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_571645.2 Gene:mbl2 / 100008009 ZFINID:ZDB-GENE-000427-2 Length:251 Species:Danio rerio


Alignment Length:161 Identity:44/161 - (27%)
Similarity:75/161 - (46%) Gaps:22/161 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 MEGQ--LSDLQEALTSITTSLKNMSAKINILHR------FKRIGSRYLHIEDIVQQNWTSALSAC 168
            :.||  :||      |:.:.|:.:|.||.::.:      ||::|.:| ::.|.|::.:...:..|
Zfish    97 LPGQDCMSD------SLKSELQKLSDKIALIEKVVNFKTFKKVGQKY-YVTDDVEETFDKGMQYC 154

  Fly   169 QKMGGNLA---SIINEADFNAIVSQLSKDNTYMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPL 230
            ...||.|.   ::...|.....||...|  ...|.|:|..::|.|:. :..|:..|..|.|.:|.
Zfish   155 SSNGGALVLPRTLEENALLKVFVSSAFK--RLFIRITDREKEGEFVD-TDRKKLTFTNWGPNQPD 216

  Fly   231 YEHVDQRCVSIHNGGMW-VASCTSDFKYICE 260
            .....|.|.:|.:.|:| ..||.|.:..|||
Zfish   217 NYKGAQDCGAIADSGLWDDVSCDSLYPIICE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 6/23 (26%)
CLECT 160..260 CDD:153057 27/103 (26%)
mbl2NP_571645.2 CLECT_collectin_like 135..248 CDD:153061 32/117 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I5252
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.960

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